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InnerEye-DeepLearning 0.7 documentation
InnerEye-DeepLearning 0.7 documentation

Overview and user guides

  • This project is now archived
  • InnerEye-DeepLearning
  • Setup
  • Windows Subsystem for Linux (WSL2)
  • Training a Hello World segmentation model
  • AzureML Setup
  • Dataset Creation
  • Building Models
  • Sample Tasks
  • Bring Your Own PyTorch Lightning Model
  • Debugging and Monitoring
  • Model Diagnostics
  • Move a model to other workspace
  • Pre-Trained Models
    • Hippocampus Segmentation Model
    • Lung Segmentation Model

Further reading for contributors

  • Software Development Process
  • Pytest and testing on CPU and GPU machines
  • Contributing
  • Model Deployment
  • Working with FastMRI models
  • Using the InnerEye code as a git submodule of your project
  • Releases
  • Training of self-supervised models
  • Changelog

API documentation

  • Machine learning
    • ML Core
      • Common
      • Lightning Components
      • Training Models
      • Testing Models
      • Configs
      • Metrics
      • Visualization
    • Models
      • Architectures
      • Blocks
      • Layers
      • Losses
    • Dataset
    • Data augmentation
    • Self-Supervised Learning (SSL)
      • SSL Lightning Containers
      • SSL Lightning Modules
      • SSL Datamodules and Datasets
      • SSL Utils
    • Configurations
      • Classification Configs
      • Regression Configs
      • Segmentation Configs
      • Self-Supervised Learning Configs
      • Other configs
    • Utils
    • Pipelines
    • Visualizers
  • Azure
  • Scripts
    • Runner
    • Submit for Inference
    • Move model
  • Common
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  • Machine learning
    • ML Core
      • Common
      • Lightning Components
      • Training Models
      • Testing Models
      • Configs
      • Metrics
      • Visualization
    • Models
      • Architectures
        • Base Model
        • U-Nets
        • Classificiation
        • Others
      • Blocks
      • Layers
      • Losses
    • Dataset
      • Full Datasets
      • Scalar Datasets
      • CroppingDataset
    • Data augmentation
      • Image Transformations
      • Transformation Pipeline
      • Utils
    • Self-Supervised Learning (SSL)
      • Encoder
      • All Other SSL Components
        • SSL Lightning Containers
          • Container
          • Image Classifier
        • SSL Lightning Modules
          • Bring Your Own Latent (BYOL)
          • SimCLR
          • SSL Classifier
          • Online Evaluator
        • SSL Datamodules and Datasets
          • Datasets
          • Dataset Class Utils
          • Datamodules
          • Transformation Utils
        • SSL Utils
    • Configurations
      • Classification Configs
        • COVID Model
      • Regression Configs
        • Dummy Regression
      • Segmentation Configs
        • Basic Models
        • HelloWorld
        • Head and Neck
        • Prostate
        • Hippocampus
        • Lung
        • Glioblastoma
      • Self-Supervised Learning Configs
        • CIFAR
        • COVID
        • Chest X-Rays
      • Other configs
        • FastMRT Varnet
    • Utils
      • Data Utils
      • Model Utils
      • Training Utils
      • Other / Misc Utils
    • Pipelines
      • Inference
      • Enesemble
    • Visualizers
  • Azure
    • Runner
    • Configuration
    • Utils
  • Scripts
    • Runner
      • Named Arguments
    • Submit for Inference
      • Named Arguments
    • Move model
      • Named Arguments
  • Common
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